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Política d’accés obert a la UB
Publicacions en accés obert derivades de l'activitat investigadora del professorat de la Universitat de Barcelona.
Shen, Yi Ru; Zaballa Larrinaga, Sofía; Bech, Xavier; Sancho Balsells, Anna; Rodriguez Navarro, Irene; Cifuentes Díaz, Carmen; Seyit Bremer, Gönül; Chun, Seung Hee; Straub, Tobias; Abante Llenas, Jordi; Merino Valverde, Iñaki; Richart, Laia; Gupta, Vipul; Li, Hao Yi; Ballasch, Iván; Alcazar, Noelia; Alberch i Vié, Jordi, 1959-; Canals i Coll, Josep M.; Abad, María; Serrano, Manuel; Klein, Rüdiger; Giralt Torroella, Albert; Toro Ruiz, Daniel del (Publication date: 2026-02-17)
Yamanaka factors (YFs) can reverse some aging features in mammalian tissues, but their effects on the brain remain largely unexplored. Here, we induced YFs in the mouse brain in a controlled spatiotemporal manner in two ...
Bosch Calvet, Mireia; Pérez Venteo, Alejandro; Cebria Xart, Alex; Garcia Cajide, Marta; Mauvezin, Caroline (Publication date: 2026-02-03)
Background Information Mitosis is crucial for the faithful transmission of genetic material, and disruptions can result in chromosomal instability (CIN), a hallmark of cancer. CIN is a known driver of tumor heterogeneity ...
Wculek, Stefanie Kristin (Publication date: 2026-02-02)
Besedina, Elizaveta; Supek, Fran (Publication date: 2026-01-27)
Cancer driver genes can undergo positive selection for various types of genetic alterations, including gain-of-function or loss-of-function mutations and copy number alterations (CNA). We investigated the landscape of ...
Khalil, Ahmed; Supek, Fran (Publication date: 2026-01-27)
Somatic cells can transform into tumors due to mutations, and the tumors further evolve towards increased aggressiveness and therapy resistance. We develop DiffInvex, a framework for identifying changes in selection acting ...
Jatzlau, Jerome; Do, Sophie-Nhi; Mees, Rebeca Angelique; Mendez, Paul Lennard; Khan, Rameez Jabeer; Maas, Lukas; Ruiz Sainz, Lidia; Martín Malpartida, Pau; Macías Hernández, María J.; Knaus, Petra (Publication date: 2025-09-05)
BackgroundReceptor-activated SMADs trimerize with SMAD4 to regulate context-dependent target gene expression. However, the presence of a single SMAD1/5/8 binding motif in cis-regulatory elements alone does not trigger ...
Calvet, Ferriol; Blanco Martínez Illescas, Raquel; Muiños Ballester, Ferran; Tretiakova, Maria; Latorre Esteves, Elena S.; Fredrickson, Jeanne; Andrianova, Maria; Pellegrini, Stefano; Rosendahl Huber, Axel; Ramis Zaldívar, Joan Enric; An, Shuyi Charlotte; Thieme, Elana; Kohrn, Brendan F.; Grau, Miguel L.; González Pérez, Abel; López Bigas, Núria; Risques, Rosa Ana (Publication date: 2025-10-30)
Men are at higher risk of several cancer types than women1. For bladder cancer the risk is four times higher for reasons that are not clear2. Smoking is also a principal risk factor for several tumour types, including ...
Hossain, Kazi A.; Nierzwicki, Lukasz; Orozco López, Modesto; Czub, Jacek; Palermo, Giulia (Publication date: 2025-09-05)
xCas9 is an evolved variant of the CRISPR-Cas9 genome editing system, engineered to improve specificity and reduce undesired off-target effects. How xCas9 expands the DNA targeting capability of Cas9 by recognising a series ...
Grille, Leandro; Gallego Perez, Diego; Darré, Leonardo; da Rosa, Gabriela; Battistini, Federica; Orozco López, Modesto; Dans, Pablo D. (Publication date: 2025-08-25)
The characterization of the conformational landscape of the RNA backbone is rather complex due to the ability of RNA to assume a large variety of conformations. These backbone conformations can be depicted by pseudotorsional ...
Martín Barraza, Josefina I.; Bars Cortina, David (Publication date: 2024-11-19)
NAFLD has emerged as a significant public health concern, with its prevalence increasing globally. Emphasizing the complex relationship between dietary patterns and epigenetic modifications such as DNA methylation or miRNA ...
Fort i Baixeras, Joana; Nicolas Arago, Adria; Maggi, Luca; Martinez Molledo, Maria; Kapiki, Despoina; Gonzalez Novoa, Paula; Gomez Gejo, Patricia; Zijlstra, Niels; Bodoy i Salvans, Susanna; Pardon, Els; Steyaert, Jan; Llorca, Oscar; Orozco López, Modesto; Cordes, Thorben; Palacín Prieto, Manuel (Publication date: 2025-01-14)
L-Amino acid transporters (LATs) play a key role in a wide range of physiological processes. Defects in LATs can lead to neurological disorders and aminoacidurias, while the overexpression of these transporters is related ...
Wallis, Ryan; Milligan, Deborah; Hughes, Bethany; Mizen, Hannah; López Domínguez, José Alberto; Eduputa, Ugochim; Tyler, Eleanor J.; Serrano Marugán, Manuel; Bishop, Cleo L. (Publication date: 2022-05-24)
Senescence occurs in response to a number of damaging stimuli to limit oncogenic transformation and cancer development. As no single, universal senescence marker has been discovered, the confident classification of senescence ...
Torrano, Verónica; Valcarcel-Jimenez, Lorea; Cortazar, Ana Rosa; Liu, Xiaojing; Urosevic, Jelena; Castillo Martin, Mireia; Fernández Ruiz, Sonia; Morciano, Giampaolo; Caro Maldonado, Alfredo; Guiu, Marc; Zúñiga García, Patricia; Graupera i Garcia-Milà, Mariona; Bellmunt i Tarragó, Anna; Pandya, Pahini; Lorente, Mar; Martín-Martín, Natalia; Sutherland, James David; Sánchez Mosquera, Pilar; Bozal Basterra, Laura; Zabala Letona, Amaia; Arruabarrena-Aristorena, Amaia; Berenguer Llergo, Antoni; Embade, Nieves; Ugalde Olano, Aitziber; Lacasa-Viscasillas, Isabel; Loizaga Iriarte, Ana; Unda Urzaiz, Miguel; Schultz, Nikolaus; Aransay, Ana M.; Sanz Moreno, Victoria; Barrio, Rosa; Velasco, Guillermo; Pinton, Paolo; Cordon Cardo, Carlos; Locasale, Jason W.; Gomis i Cabré, Roger; Carracedo, Arkaitz (Publication date: 2017-01-16)
Cellular transformation and cancer progression is accompanied by changes in the metabolic landscape. Master co-regulators of metabolism orchestrate the modulation of multiple metabolic pathways through transcriptional ...
Faria, Melissa; Garcia-Reyero, Natàlia; Padrós, Francesc; Babin, Patrick J.; Sebastián Muñoz, David; Cachot, Jérôme; Prats, Eva; Arick II, Mark; Rial, Eduardo; Knoll-Gellida, Anja; Mathieu, Guilaine; Le Bihanic, Florane; Escalon, B. Lynn; Zorzano Olarte, Antonio; Soares, Amadeu M. V. M.; Raldúa, Demetrio (Publication date: 2016-06-21)
Terrorist use of organophosphorus-based nerve agents and toxic industrial chemicals against civilian populations constitutes a real threat, as demonstrated by the terrorist attacks in Japan in the 1990 s or, even more ...
Rodriguez, Jessica; Battistini, Federica; Learte-Aymamí, Soraya; Orozco López, Modesto; Mascareñas, José L. (Publication date: 2026-02-25)
We report the modelling of the DNA complex of an artificial miniprotein composed of two zinc finger modules and an AT-hook linking peptide. The computational study provides for the first time a structural view of these ...
Hospital Gasch, Adam; Andrio, Pau; Cugnasco, Cesare; Codo, Laia; Becerra, Yolanda; Dans, Pablo D.; Battistini, Federica; Torres, Jordi; Goñi Macià, Josep Ramon; Orozco López, Modesto; Gelpí Buchaca, Josep Lluís (Publication date: 2017-08-30)
Molecular dynamics simulation (MD) is, just behind genomics, the bioinformatics tool that generates the largest amounts of data, and that is using the largest amount of CPU time in supercomputing centres. MD trajectories ...
Nadal Ribelles, Mariona; Islam, Saiful; Wei, Wu; Latorre Domenech, Pablo; Nguyen, Michelle; Nadal Clanchet, Eulàlia de; Posas, Francesc; Steinmetz, Lars M. (Publication date: 2025-04-25)
Single-cell RNA sequencing has revealed extensive cellular heterogeneity within many organisms, but few methods have been developed for microbial clonal populations. The yeast genome displays unusually dense transcript ...
Cristóbal Lecina, Edgar; Costantino, Andrea R.; Grabulosa, Arnald; Riera i Escalé, Antoni; Verdaguer i Espaulella, Xavier (Publication date: 2016-02-08)
The asymmetric Pauson−Khand reaction catalyzed by [Rh(COD)(MaxPHOS)]BF4 is described. Several 1,6-enynes have been chosen as model substrates affording moderate yields and selectivities of up to 86% ee. Besides binap-type ...
Castillo Corullón, Judit; Gay i Marín, Marina; Iglesia Rodríguez, Alberto de la; Arauz-Garofalo, Gianluca; Vilanova, Mar; Leiva, Marina; Corral Molina, Juan Manuel; Guimerà, Marta; Manau Trullàs, Dolors; Vilaseca, Marta; Jodar Bifet, Meritxell; Oliva Virgili, Rafael (Publication date: 2025-06-25)
Protamines are considered among the most relevant sperm proteins because of their functional implications on paternal genome packaging and protection. Although the proteomic evaluation of protamines is technically challenging, ...
Tomato Genome Consortium; Orozco López, Modesto (Publication date: 2012-07-05)
Tomato (Solanum lycopersicum) is a major crop plant and a model system for fruit development. Solanum is one of the largest angiosperm genera1 and includes annual and perennial plants from diverse habitats. Here we present ...