Now showing items 81-100 of 418

    In vivo photocontrol of orexin receptors with a nanomolar light-regulated analogue of orexin-B 

    Prischich, Davia; Sortino, Rosalba; Gomila Juaneda, Alexandre; Matera, Carlo; Guardiola Bagán, Salvador; Nepomuceno, Diane; Varese, Monica; Bonaventure, Pascal; Lecea, Luis de; Giralt Lledó, Ernest; Gorostiza Langa, Pablo Ignacio (Publication date: 2024-08-26)

    Orexinergic neurons are critically involved in regulating arousal, wakefulness, and appetite. Their dysfunction has been associated with sleeping disorders, and non-peptide drugs are currently being developed to treat ...

    Sudemycin K: a synthetic anti-tumor splicing inhibitor variant with improved activity and versatile chemistry 

    Makowski, Kamil; Vigevani, Luisa; Albericio Palomera, Fernando; Valcárcel, Juan; Álvarez Domingo, Mercedes (Publication date: 2017-03-09)

    Important links exist between the process of pre-mRNA splicing and cancer, as illustrated by the frequent mutation of splicing factors in tumors and the emergence of various families of antitumor drugs that target components ...

    The zinc-finger protein Z4 cooperates with condensin II to regulate somatic chromosome pairing and 3D chromatin organization 

    Puerto Plasencia, Marta; Shukla, Mamta; Bujosa Rodriguez, Paula; Perez Roldan, Juan; Torras Llort, Mònica; Tamirisa, Srividya; Carbonell Sanroma, Albert; Solé Serra, Carme; Puspo, Joynob Akter; Cummings, Christopher T.; Nadal Clanchet, Eulàlia de; Posas, Francesc; Azorín, F.; Rowley, M. Jordan (Publication date: 2025-04-29)

    Chromosome pairing constitutes an important level of genome organization, yet the mechanisms that regulate pairing in somatic cells and the impact on 3D chromatin organization are still poorly understood. Here, we address ...

    Deciphering the roadmap of in vivo reprogramming toward pluripotency 

    Chondronasiou, Dafni; Martínez de Villarreal, Jaime; Melendez, Elena; Lynch, Cian J.; Pozo, Natalia del; Kovatcheva, Marta; Aguilera, Mònica; Prats, Neus; Real, Francisco X.; Serrano Marugán, Manuel (Publication date: 2022-10-27)

    Differentiated cells can be converted into pluripotent stem cells by expressing the transcription factors OCT4, SOX2, KLF4, and MYC (OSKM) in a process known as reprogramming. Here, using single-cell RNA sequencing of ...

    Hotspot propensity across mutational processes 

    Arnedo Pac, Claudia; Muiños Ballester, Ferran; González Pérez, Abel David; López Bigas, Núria (Publication date: 2024-05-24)

    The sparsity of mutations observed across tumours hinders our ability to study mutation rate variability at nucleotide resolution. To circumvent this, here we investigated the propensity of mutational processes to form ...

    Resistance to taxanes in triple negative breast cancer associates with the dynamics of a CD49f+ tumor initiating population 

    Gómez Miragaya, Jorge; Palafox Sánchez, Marta; Paré, Laia; Yoldi, Guillermo; Ferrer, Irene; Vila, Sergi; Galván, Patricia; Pellegrini, Pasquale; Pérez-Montoyo, Hector; Igea, Ana; Muñoz Moruno, Purificación; Esteller, Manel; Nebreda, Àngel R.; Urruticoechea Ribate, Ander; Morilla, Idoia; Pernas, Sònia; Climent, Fina; Soler, María Teresa; Petit, Anna; Serra Elizalde, Violeta; Prat Aparicio, Aleix; González Suárez, Eva (Publication date: 2019-03-12)

    Taxanes are a mainstay of treatment for breast cancer, but resistance often develops followed by metastatic disease and mortality. Aiming to reveal the mechanisms underlying taxane resistance, we used breast cancer ...

    Mechanisms of metastatic colorectal cancer 

    Cañellas Socias, Adria; Sancho Suils, Elena; Batlle Gómez, Eduard (Publication date: 2024-06-03)

    Direct evidence of the presence of cross-linked Aβ dimers in the brains of Alzheimer's disease patients 

    Vázquez de la Torre Cervera, Aurelio; Gay i Marín, Marina; Vilaprinyó Pascual, Sílvia; Mazzucato, Roberta; Serra Batiste, Montserrat; Vilaseca Casas, Marta; Carulla Casanovas, Natàlia (Publication date: 2018-03-23)

    Brain-derived amyloid-β (Aβ) dimers are associated with Alzheimer´s disease (AD). However, their covalent nature remains controversial. This feature is relevant, as a covalent cross-link would make brain-derived dimers ...

    A multifunctional toolkit for target-directed cancer therapy 

    Terrazas Martínez, Montserrat; Sánchez, Dani; Battistini, Federica; Villegas, Núria; Brun-Heath, Isabelle; Orozco López, Modesto (Publication date: 2019-01-17)

    Here we present 2shRNA, a shRNA-based nanobinder, which can simultaneously attack two therapeutic targets involved in drug resistance pathways and can additionally bind accessory molecules such as cell targeting peptides ...

    Molecular causes of primary microcephaly and related diseases: a report from the UNIA Workshop 

    Stracker, Travis H.; Morrison, Ciaran G.; Gergely, Fanni (Publication date: 2020-05-19)

    The International University of Andalucía (UNIA) Current Trends in Biomedicine Workshop on Molecular Causes of Primary Microcephaly and Related Diseases took place in Baeza, Spain, November 18–20, 2019. This meeting brought ...

    BICD2 phosphorylation regulates dynein function and centrosome separation in G2 and M 

    Gallisà Suñé, Núria; Sànchez Fernàndez de Landa, Paula; Zimmermann, Fabian; Serna, Marina; Regué, Laura; Paz Domínguez, Joel; Llorca, Oscar; Luders, Jens; Roig Amorós, Joan (Publication date: 2023-11-17)

    The activity of dynein is regulated by a number of adaptors that mediate its interaction with dynactin, effectively activating the motor complex while also connecting it to different cargos. The regulation of adaptors is ...

    Probing the Kinetic and Thermodynamic Fingerprints of Anti-EGF Nanobodies by Surface Plasmon Resonance 

    Guardiola Bagán, Salvador; Varese, Monica; Taulés i Marín, Marta; Díaz Lobo, Mireia; García Arroyo, Jesús; Giralt Lledó, Ernest (Publication date: 2021-03-11)

    Despite the widespread use of antibodies in clinical applications, the precise molecular mechanisms underlying antibody-antigen (Ab-Ag) interactions are often poorly understood. In this study, we exploit the technical ...

    The need to implement FAIR principles in biomolecular simulations 

    Amaro, Rommie E.; Åqvist, Johan; Bahar, Ivet; Battistini, Federica; Bellaïche, Adam; Beltran, Daniel; Biggin, Philip C.; Bonomi, Massimiliano; Bowman, Gregory R.; Bryce, Richard A.; Bussi, Giovanni; Carloni, Paolo; Case, David A.; Cavalli, Andrea; Chang, Chia-En A.; Cheatham, Thomas E.; Cheung, Margaret S.; Chipot, Christophe; Chong, Lillian T.; Choudhary, Preeti; Cisneros, G. Andrés; Clementi, Cecilia; Collepardo Guevara, Rosana; Coveney, Peter; Covino, Roberto; Crawford, T. Daniel; Delemotte, Lucie; Essex, Jonathan W.; Fraternali, Franca; Gao, Jiali; Gelpí, Josep Lluís; Gervasio, Francesco Luigi; González Nilo, Fernando Danilo; Groot, Bert L. de; Grubmüller, Helmut; Guenza, Marina G.; Guzman, Horacio V.; Harris, Sarah; Head Gordon, Teresa; Hernandez, Rigoberto; Hospital, Adam; Huang, Niu; Huang, Xuhui; Hummer, Gerhard; Iglesias Fernández, Javier; Jensen, Jan H.; Jha, Shantenu; Jiao, Wanting; Jorgensen, William L.; Kamerlin, Shina Caroline Lynn; Khalid, Syma; Laughton, Charles A.; Levitt, Michael; Limongelli, Vittorio; Lindahl, Erik; Lindorff-Larsen, Kresten; Loverde, Sharon; Lundborg, Magnus; Luo, Yun Lyna; Luque Garriga, F. Xavier; Lynch, Charlotte I.; MacKerell, Alexander; Magistrato, Alessandra; Marrink, Siewert J.; Martin, Hugh; McCammon, J. Andrew; Merz, Kenneth; Moliner, Vicent; Mulholland, Adrian J.; Murad, Sohail; Naganathan, Athi N.; Nangia, Shikha; Noe, Frank; Noy Freixa, Agnès; Olah, Julianna; O’Mara, Megan L.; Ondrechen, Mary Jo; Onuchic, Jose N.; Onufriev, Alexey; Orozco López, Modesto; Osuna, Sílvia; Palermo, Giulia; Panchenko, Anna R.; Pantano, Sergio; Parish, Carol; Parrinello, Michele; Peraro, Matteo dal; Perez Acle, Tomas; Pérez, Alberto; Perilla, Juan R.; Pettitt, B. Montgomery; Pietropaolo, Adriana; Piquemal, Jean Philip; Poma, Adolfo B.; Praprotnik, Matej; Ramos, Maria João; Ren, Pengyu; Reuter, Nathalie; Roitberg, Adrian; Rosta, Edina; Rothlisberger, Ursula; Roux, Benoit; Rovira Virgili, Maria Del Carme; Sanbonmatsu, Karissa Y.; Schlick, Tamar; Shaytan, Alexey K.; Simmerling, Carlos; Smith, Jeremy C.; Sugita, Yuji; Świderek, Katarzyna; Taiji, Makoto; Tao, Peng; Tieleman, D. Peter; Tikhonova, Irina G.; Tirado Rives, Julian; Tuñón, Iñaki; van der Kamp, Marc W.; van der Spoel, David; Velankar, Sameer; Vivo, Marco de; Voth, Gregory A.; Wade, Rebecca; Warshel, Ariel; Welborn, Valerie Vaissier; Wetmore, Stacey D.; Wheeler, Travis J.; Wong, Chung F.; Yang, Lee Wei; Zacharias, Martin (Publication date: 2025-05-13)

    In the Big Data era, a change of paradigm in the use of molecular dynamics is required. Trajectories should be stored under FAIR (findable, accessible, interoperable and reusable) requirements to favor its reuse by the ...

    On the impact of incomplete taxon sampling on the relative timing of gene transfer events 

    Bernabeu, Moises; Manzano Morales, Saioa; Gabaldón Estevan, Juan Antonio, 1973- (Publication date: 2024-11-25)

    A recent study questioned the use of branch length methods to assess the relative timing of horizontal gene transfers because of the effects of so-called "ghost" lineages. This Formal Comment discusses key considerations ...

    The Tousled-like kinases regulate genome and epigenome stability: implications in development and disease 

    Segura Bayona, Sandra; Stracker, Travis H. (Publication date: 2019-09-23)

    The Tousled-like kinases (TLKs) are an evolutionarily conserved family of serine–threonine kinases that have been implicated in DNA replication, DNA repair, transcription, chromatin structure, viral latency, cell cycle ...

    Bottom-Up Design Approach for OBOC Peptide Libraries 

    Kalafatovic, Daniela; Mausa, Goran; Resetar Maslov, Dina; Giralt Lledó, Ernest (Publication date: 2021-03-11)

    One-bead-one-compound peptide libraries, developed following the top-down experimental approach, have attracted great interest in the identification of potential ligands or active peptides. By exploiting a reverse experimental ...

    Dual-specificity phosphatase 1 (Dusp1) has a central role in redox homeostasis and inflammation in the mouse cochlea 

    Bermúdez Muñoz, José M.; Celaya, Adelaida M.; García Mato, Ángela; Muñoz Espín, Daniel; Rodríguez de la Rosa, Lourdes; Serrano Marugán, Manuel; Varela Nieto, Isabel (Publication date: 2021-09-17)

    Stress-activated protein kinases (SAPK) are associated with sensorineural hearing loss (SNHL) of multiple etiologies. Their activity is tightly regulated by dual-specificity phosphatase 1 (DUSP1), whose loss of function ...

    Profound cell wall remodeling in Candida parapsilosis during systemic infection confers simultaneous tolerance to echinocandins and host immunity. 

    Daneshnia, Farnaz; Schikora Tamarit, Miquel Àngel; Funtes, Diego; Artigues Lleixà, Maria; Gabaldón Esteban, Toni; Arastehfar, Amir (Publication date: 2026-03-02)

    Antifungal tolerance can promote the emergence of resistance yet often incurs fitness costs for fungal pathogens. How tolerant populations compensate for these deficits and how they may be therapeutically targeted remain ...

    Metastatic recurrence in colorectal cancer arises from residual EMP1+ cells 

    Batlle, Eduard; Cañellas Socias, Adrià; Cortina, Carme; Hernando Momblona, Xavier; Palomo Ponce, Sergio; Mulholland, Eoghan J.; Turón, Gemma; Mateo, Lidia; Conti, Sefora; Roman, Olga; Sevillano, Marta; Slebe, Felipe; Stork, Diana; Caballé Mestres, Adrià; Berenguer Llergo, Antoni; Álvarez Varela, Adrián; Fenderico, Nicola; Novellasdemunt, Laura; Jiménez Gracia, Laura; Sipka, Tamara; Bardia, Lidia; Lorden, Patricia; Colombelli, Julien; Heyn, Holger; Trepat Guixer, Xavier; Tejpar, Sabine; Sancho, Elena; Tauriello, Daniele V. F.; Leedham, Simon; Attolini, Camille Stephan-Otto (Publication date: 2022-11-23)

    Around 30-40% of patients with colorectal cancer (CRC) undergoing curative resection of the primary tumour will develop metastases in the subsequent years1. Therapies to prevent disease relapse remain an unmet medical need. ...

    Interleukin-6-elicited chronic neuroinflammation may decrease survival but is not sufficient to drive disease progression in a mouse model of Leigh syndrome 

    Aguilar, Kevin; Canal, Carla; Comes, Gemma; Díaz Clavero, Sandra; Llanos, María Ángeles; Quintana, Albert; Sanz, Elisenda; Hidalgo, Juan (Publication date: 2024-02-06)

    Mitochondrial diseases (MDs) are genetic disorders characterized by dysfunctions in mitochondria. Clinical data suggest that additional factors, beyond genetics, contribute to the onset and progression of this group of ...