dc.contributor.author |
Di Tommaso, Paolo |
dc.contributor.author |
Orobitg Cortada, Miquel |
dc.contributor.author |
Guirado Fernández, Fernando |
dc.contributor.author |
Cores Prado, Fernando |
dc.contributor.author |
Espinosa, Toni |
dc.contributor.author |
Notredame, Cedric |
dc.date |
2016-03-01T09:40:44Z |
dc.date |
2016-03-01T09:40:44Z |
dc.date |
2010 |
dc.identifier |
1367-4803 |
dc.identifier |
http://hdl.handle.net/10459.1/56659 |
dc.identifier |
https://doi.org/10.1093/bioinformatics/btq304 |
dc.identifier.uri |
http://hdl.handle.net/10459.1/56659 |
dc.description |
Summary: We present the first parallel implementation of the
T-Coffee consistency-based multiple aligner. We benchmark it on
the Amazon Elastic Cloud (EC2) and show that the parallelization
procedure is reasonably effective. We also conclude that for a web
server with moderate usage (10K hits/month) the cloud provides a
cost-effective alternative to in-house deployment. |
dc.description |
Centro de Regulación Genómica (CRG to C.N., P.T., C.K.); Plan Nacional (BFU2008-00419); Lleida University, the Spanish ministry of education (TIN2008-05913 to M.O., F.G., F.C.); the Consolider Project (CSD 2007-00050); Super-computacion y e-Cienia (SYEC). |
dc.language |
eng |
dc.publisher |
Oxford University Press |
dc.relation |
Reproducció del document publicat a https://doi.org/10.1093/bioinformatics/btq304 |
dc.relation |
Bioinformatics, 2010, vol. 26, núm. 15, p. 1903-1904 |
dc.rights |
cc-by-nc, (c) Di Tomasso et al., 2010 |
dc.rights |
http://creativecommons.org/licenses/by-nc-nd/3.0/es/ |
dc.rights |
info:eu-repo/semantics/openAccess |
dc.title |
Cloud-Coffee: implementation of a parallel consistency-based multiple alignment algorithm in the T-Coffee package and its benchmarking on the Amazon Elastic-Cloud |
dc.type |
article |
dc.type |
publishedVersion |