Fast evaluation of the adsorption energy of organic molecules on metals via graph neural networks

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Pablo-García, Sergio
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Morandi, Santiago
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Vargas-Hernández, Rodrigo A.
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Jorner, Kjell
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Ivković, Žarko
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López, Núria
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Aspuru-Guzik, Alán
dc.date.accessioned
2023-05-25T12:59:46Z
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2024-04-23T10:37:02Z
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2023-05-25T12:59:46Z
dc.date.available
2024-04-23T10:37:02Z
dc.date.issued
2023-05-01
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http://hdl.handle.net/2072/534624
dc.description.abstract
Modeling in heterogeneous catalysis requires the extensive evaluation of the energy of molecules adsorbed on surfaces. This is done via density functional theory but for large organic molecules it requires enormous computational time, compromising the viability of the approach. Here we present GAME-Net, a graph neural network to quickly evaluate the adsorption energy. GAME-Net is trained on a well-balanced chemically diverse dataset with C1–4 molecules with functional groups including N, O, S and C6–10 aromatic rings. The model yields a mean absolute error of 0.18 eV on the test set and is 6 orders of magnitude faster than density functional theory. Applied to biomass and plastics (up to 30 heteroatoms), adsorption energies are predicted with a mean absolute error of 0.016 eV per atom. The framework represents a tool for the fast screening of catalytic materials, particularly for systems that cannot be simulated by traditional methods.
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10 p.
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dc.language.iso
eng
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dc.publisher
Springer Nature
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dc.rights
This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
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RECERCAT (Dipòsit de la Recerca de Catalunya)
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Química
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dc.title
Fast evaluation of the adsorption energy of organic molecules on metals via graph neural networks
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dc.type
info:eu-repo/semantics/article
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dc.type
info:eu-repo/semantics/publishedVersion
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dc.subject.udc
00
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dc.embargo.terms
cap
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This work was supported by Ministerio de Ciencia e Innovación, with ref. no. PID2021-122516OB-I00 and with a Mobility Grant within Severo Ochoa MCIN/AEI/10.13039/501100011033 CEX2019 000925 S
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dc.relation.projectID
NCCR Catalysis (grant number 180544), a National Centre of Competence in Research funded by the Swiss National Science Foundation
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Generalitat de Catalunya (2021 SGR 01155)
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Swedish Research Council (no. 2020-00314)
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dc.identifier.doi
https://doi.org/10.1038/s43588-023-00437-y
dc.rights.accessLevel
info:eu-repo/semantics/openAccess


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