A semi-empirical risk panel to monitor epidemics: multi-faceted tool to assist healthcare and public health professionals

dc.contributor
Institut Català de la Salut
dc.contributor
[Perramon-Malavez A, Bravo M, López de Rioja V, Alonso S, Álvarez-Lacalle E] Department of Physics, Computational Biology and Complex Systems (BIOCOM-SC) group, Barcelona School of Agri-Food and Biosystems Engineering, Universitat Politècnica de Catalunya, Castelldefels, Spain. [Català M] Health Data Sciences, NDORMS, University of Oxford, Oxford, United Kingdom. [Soriano-Arandes A] Unitat de Patologia Infecciosa i Immunodeficiències de Pediatria, Vall d’Hebron Hospital Universitari, Barcelona, Spain. Grup de Recerca d’Infecció i Immunitat al Pacient Pediàtric, Vall d’Hebron Institut de Recerca (VHIR), Barcelona, Spain
dc.contributor
Vall d'Hebron Barcelona Hospital Campus
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Bravo Masferrer, Mario
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Lopez de Rioja, Victor
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Alonso, Sergio
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Alvarez Lacalle, Enrique
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Perramon Malavez, Aida
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Català, Martí
dc.contributor.author
Soriano-Arandes, Antoni
dc.date.accessioned
2024-06-06T13:35:25Z
dc.date.available
2024-06-06T13:35:25Z
dc.date.issued
2024-02-16T08:08:21Z
dc.date.issued
2024-02-16T08:08:21Z
dc.date.issued
2024-01-08
dc.identifier
Perramon-Malavez A, Bravo M, López de Rioja V, Català M, Alonso S, Álvarez-Lacalle E, et al. A semi-empirical risk panel to monitor epidemics: multi-faceted tool to assist healthcare and public health professionals. Front Public Heal. 2024 Jan 8;11:1307425.
dc.identifier
2296-2565
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https://hdl.handle.net/11351/11056
dc.identifier
10.3389/fpubh.2023.1307425
dc.identifier
38259774
dc.identifier
001154942500001
dc.identifier.uri
http://hdl.handle.net/11351/11056
dc.description.abstract
Bronchiolitis; Epidemic indicators; Threshold
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Bronquiolitis; Indicadores epidémicos; Umbral
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Bronquiolitis; Indicadors epidèmics; Llindar
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Introduction: Bronchiolitis, mostly caused by Respiratory Syncytial Virus (RSV), and influenza among other respiratory infections, lead to seasonal saturation at healthcare centers in temperate areas. There is no gold standard to characterize the stages of epidemics, nor the risk of respiratory infections growing. We aimed to define a set of indicators to assess the risk level of respiratory viral epidemics, based on both incidence and their short-term dynamics, and considering epidemical thresholds. Methods: We used publicly available data on daily cases of influenza for the whole population and bronchiolitis in children <2 years from the Information System for Infection Surveillance in Catalonia (SIVIC). We included a Moving Epidemic Method (MEM) variation to define epidemic threshold and levels. We pre-processed the data with two different nowcasting approaches and performed a 7-day moving average. Weekly incidences (cases per 105 population) were computed and the 5-day growth rate was defined to create the effective potential growth (EPG) indicator. We performed a correlation analysis to define the forecasting ability of this index. Results: Our adaptation of the MEM method allowed us to define epidemic weekly incidence levels and epidemic thresholds for bronchiolitis and influenza. EPG was able to anticipate daily 7-day cumulative incidence by 4–5 (bronchiolitis) or 6–7 (influenza) days. Discussion: We developed a semi-empirical risk panel incorporating the EPG index, which effectively anticipates surpassing epidemic thresholds for bronchiolitis and influenza. This panel could serve as a robust surveillance tool, applicable to respiratory infectious diseases characterized by seasonal epidemics, easy to handle for individuals lacking a mathematical background.
dc.description.abstract
The author(s) declare financial support was received for the research, authorship, and/or publication of this article. Grant number 202134-30-31, funded by “La Fundació La Marató de TV3.” Grant PDI2022-139215NB-I00 funded by MCIN/AEI/10.13039/501100011033 and by “ERDF A way of making Europe.”
dc.format
application/pdf
dc.language
eng
dc.publisher
Frontiers Media
dc.relation
Frontiers in Public Health;11
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https://doi.org/10.3389/fpubh.2023.1307425
dc.rights
Attribution 4.0 International
dc.rights
http://creativecommons.org/licenses/by/4.0/
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info:eu-repo/semantics/openAccess
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Scientia
dc.subject
Bronquiolitis
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Grip
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Aparell respiratori - Malalties
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Assistència sanitària
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DISEASES::Respiratory Tract Diseases::Bronchial Diseases::Bronchitis::Bronchiolitis
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DISEASES::Respiratory Tract Diseases::Respiratory Tract Infections
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HEALTH CARE::Health Services Administration::Patient Care Management::Delivery of Health Care
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DISEASES::Respiratory Tract Diseases::Respiratory Tract Infections::Influenza, Human
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ENFERMEDADES::enfermedades respiratorias::enfermedades bronquiales::bronquitis::bronquiolitis
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ENFERMEDADES::enfermedades respiratorias::infecciones del tracto respiratorio
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ATENCIÓN DE SALUD::administración de los servicios de salud::gestión de la atención al paciente::prestación sanitaria
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ENFERMEDADES::enfermedades respiratorias::infecciones del tracto respiratorio::gripe humana
dc.title
A semi-empirical risk panel to monitor epidemics: multi-faceted tool to assist healthcare and public health professionals
dc.type
info:eu-repo/semantics/article
dc.type
info:eu-repo/semantics/publishedVersion


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