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oai:recercat.cat:20.500.12327/29792025-10-22T11:23:32Zcom_2072_4428com_2072_4427col_2072_487898

The genome of woodland strawberry (Fragaria vesca) Shulaev, Vladimir Sargent, Daniel J. Crowhurst, Ross N. Mockler, Todd C. Folkerts, Otto Delcher, Arthur L. Jaiswal, Pankaj Mockaitis, Keithanne Liston, Aaron Mane, Shrinivasrao P. Burns, Paul Davis, Thomas M. Slovin, Janet P. Bassil, Nahla Hellens, Roger P. Evans, Clive Harkins, Tim Kodira, Chinnappa Desany, Brian Crasta, Oswald R. Jensen, Roderick V. Allan, Andrew C. Michael, Todd P. Setubal, Joao Carlos Celton, Jean-Marc Rees, D. Jasper G. Williams, Kelly P. Holt, Sarah H. Ruiz Rojas, Juan Jairo Chatterjee, Mithu Liu, Bo Silva, Herman Meisel, Lee Adato, Avital Filichkin, Sergei A. Troggio, Michela Viola, Roberto Ashman, Tia-Lynn Wang, Hao Dharmawardhana, Palitha Elser, Justin Raja, Rajani Priest, Henry D. Bryant Jr., Douglas W. Fox, Samuel E. Givan, Scott A. Wilhelm, Larry J. Naithani, Sushma Christoffels, Alan Salama, David Y. Carter, Jade Lopez Girona, Elena Zdepski, Anna Wang, Wenqin Kerstetter, Randall A. Schwab, Wilfried Korban, Schuyler S. Davik, Jahn Monfort, Amparo Denoyes-Rothan, Beatrice Arús, Pere Mittler, Ron Flinn, Barry Aharoni, Asaph Bennetzen, Jeffrey L. Salzberg, Steven L. Dickerman, Allan W. Velasco, Riccardo Borodovsky, Mark Veilleux, Richard E. Folta, Kevin M. Producció Vegetal Genòmica i Biotecnologia The woodland strawberry, Fragaria vesca (2n = 2x = 14), is a versatile experimental plant system. This diminutive herbaceous  perennial has a small genome (240 Mb), is amenable to genetic transformation and shares substantial sequence identity with the  cultivated strawberry (Fragaria × ananassa) and other economically important rosaceous plants. Here we report the draft F. vesca  genome, which was sequenced to ×39 coverage using second-generation technology, assembled de novo and then anchored to the  genetic linkage map into seven pseudochromosomes. This diploid strawberry sequence lacks the large genome duplications seen in  other rosids. Gene prediction modeling identified 34,809 genes, with most being supported by transcriptome mapping. Genes critical  to valuable horticultural traits including flavor, nutritional value and flowering time were identified. Macrosyntenic relationships  between Fragaria and Prunus predict a hypothetical ancestral Rosaceae genome that had nine chromosomes. New phylogenetic  analysis of 154 protein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted. 2025-10-22T11:23:32Z 2025-10-22T11:23:32Z 2025-10-22T11:23:32Z 2010-12-26 info:eu-repo/semantics/article Shulaev, Vladimir, Daniel J. Sargent, Ross Crowhurst, Todd C. Mockler, Otto Folkerts, Arthur L. Delcher, Pankaj Jaiswal, et al. 2010. “The Genome of Woodland Strawberry (Fragaria Vesca).” Nature Genetics 43 (2): 109–116. doi:10.1038/ng.740 1061-4036 http://hdl.handle.net/20.500.12327/2979 https://doi.org/10.1038/ng.740 eng Nature Genetics http://creativecommons.org/licenses/by-nc-sa/4.0/ info:eu-repo/semantics/openAccess Attribution-NonCommercial-ShareAlike 4.0 International Nature Research