Mathematical topics in phylogenetics

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Título:	Mathematical topics in phylogenetics
Autor/a:	Pérez De Los Cobos Hermosa, Cassius Manuel
Otros autores:	Universitat Politècnica de Catalunya. Departament de Matemàtiques; Max F. Perutz Laboratories; Casanellas Rius, Marta; Von Haeseler, Arndt
Abstract:	An evolutionary process is frequently modeled as a sequence of the four bases A,C,G,T, each of them changing independently following a Markov process. The main goal of this project are two: first of all, we wanted to understand and explain, from a mathematically rigorous point of view, the modeling of an evolutionary process as a continuous Markov process, and why Lie Markov models are an adequate option for this task. Secondly, we explain how we tried to improve a previous implementation of Lie Markov models in IQ-TREE, an algorithm for inferring phylogenies.
Abstract:	Outgoing
Materia(s):	-Àrees temàtiques de la UPC::Matemàtiques i estadística::Anàlisi matemàtica -Genetics -Population dynamics -Phylogeny -Lie markov models -Dinàmica de poblacions -Genètica -Classificació AMS::92 Biology and other natural sciences::92D Genetics and population dynamics
Derechos:	http://creativecommons.org/licenses/by-nc-nd/3.0/es/
Tipo de documento:	Trabajo fin de máster
Editor:	Universitat Politècnica de Catalunya; Universität Wien
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Pérez De Los Cobos Hermosa, Cassius Manuel

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